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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891973.1_cds_XP_016446880.1_41695
CDS Infomation

[gene=LOC107771932] [db_xref=GeneID:107771932] [protein=protein MICRORCHIDIA 1-like] [protein_id=XP_016446880.1] [location=join(179407..179659,179741..179815,180044..180078,182410..182488,182578..182667,182881..182956,184028..184106,184226..184354,185783..185881,189427..189534,189622..189771,190023..190112,190578..190629,190704..190815,191741..191975,192178..192266,193826..193868,194010..194117)] [gbkey=CDS]
Sequence

ATGTCGCCTAAGCAAGAGAAGCCCCCAATCGAGGTCGTCGAACTCGACAGTAGCGACGAC
GAAGACGCCGGCGTTTCCGTCGTCGGGAAGAGAAAACCAGACATGCCTCACGGAGGAACT
TCACTGAGTAAATCACCGGTAATAGAAAGTCCCAACGCGATTGTTCCATCCAATTACAGG
CCACTGGAGTCTCGAAGTTTCTGGAAAGCTGGCAATTTTGAAGTTGGTCGTATCAAATCA
ACTGCTATGCATGGTGAATTGGAACATGCGCGTGTTCATCCCAAATTTCTGCATTCCAAT
GCTACTTCTCATAAATGGGCGTTCGGAGCAATAGCCGAGCTTTTGGATAATGCTGTTGAC
GAGATAAGCAGTGGGGCAACTTGCGTGAAAGTTGACAGAATTTATAACCCAAGGGACAAC
TCTCCTGCATTGCTCTTCCAGGACGATGGGGGTGGTATGGATCCAGAACGTCTTCGCAAA
TGCATGAGCCTGGGTTATTCTTCAAAAACATCAAACTCAACAATTGGACAATATGGTAAT
GGATTTAAGACGAGTACCATGAGGTTGGGTGCTGATGTAATTGTTTTCAGCCGTTCATCT
CAGTCAGGCCGAGCAACTCAAAGTATTGGTCTTCTGTCCTATACATTTCTTCGGAGAACA
GGGCAAGATGATGTGATTGTTCCAATGATCGATTTTGATATCTCTGACCATTGGGCTGAA
CCAATACTATGTGGCTCTCAAGATGATTGGTCAACTAACTTGAAAACAATCCTTGAGTGG
TCCCCTTTTGCAACAAAGATGGATCTTATGCAACAGTTTGAGGATATAAAATCACATGGA
ACTAAGATTATAGTCTACAACCTATGGCTGAATGATGAAGGAATTTATGAGCTGAACTTT
GATGACGATGATGAGGATATAATGTTGAGAGATGAAGCTAATTGTGGAAATACATCAAAA
ACAAACAAGAGAGCGCTTGAACAGCAATCCCATATTTCCTATCGCTTACGCTACTCACTA
AGAGCATACACATCCATATTATACCTCAAAAAATTTACAAATTTCAGTATCATACTAAGA
GGGAAGCCCGTTGAGCAGTTTAATATTCTTGAGGAGTTGAAGCACTCAAAAGTAATCACC
TACAGACCACAGCTTGCTGGGACATCAAAGGAGATCTTGGTTGAAACAACTTTAGGCTTC
GTCAAGGACGCTCCATCACCAGTTTGTGGATTCAACATTTACCACAAAAATCGCCTCATC
AGGCCATTCTGGAAAGTTACTGCAGATGGTTCTTCCAAAGGAAATGGTGTTGTTGGTGTT
CTGGAAGCAAATTTCATAGAACCTGCACATGACAAGCAAGATTTTGAAAGATCGTCTCTG
TTTTTCAAGCTGGAGACTAGGCTAAAGCAAATGGTGATGGACTACTGGAAAGGTCATTGT
CACCTGATAGGACTGAAGCCTCTTGAACCACATTTGCAAAATCTTCTGAGAGAGCAAGTG
GATAATGCTCAAATACAGTCGCCAACTATTGACCGTCAGCCAGTTACCGGCCTTGCAGCT
CATCCCAGGCCAGATTTCCGTTCTGTGCAGAGTGAAAAAGTGGGAAGAACCAATTCCAAT
AGGGAATTGCCAGCTGTACAACCTATTACAGGGAATGCAACTGGATCTGTTAAAAACGAT
ACACAAATAGCCAGTTCAAGTTGCATGTCAATTGATCAGATTTGTGAAGAGAATATCCAA
CTCTTTAGGAGGTGTGAGTCATACATCCAAAGGGAAACCGAGTTGAAACGTACAATAGAG
GAGCTTGAGAAAGAATTAGAGGACACTAAAAAGAAATCTGCCGATCTTTCTTCACGCCTG
GAAAGTCAGAAAAAGCTTAAACTTCTGAAACAATTTGGGTAG

Peptide Sequence

PEP ID

XP_016446880.1
PEP Infomation

PREDICTED: protein MICRORCHIDIA 1-like [Nicotiana tabacum]
Sequence

MSPKQEKPPIEVVELDSSDDEDAGVSVVGKRKPDMPHGGTSLSKSPVIESPNAIVPSNYR
PLESRSFWKAGNFEVGRIKSTAMHGELEHARVHPKFLHSNATSHKWAFGAIAELLDNAVD
EISSGATCVKVDRIYNPRDNSPALLFQDDGGGMDPERLRKCMSLGYSSKTSNSTIGQYGN
GFKTSTMRLGADVIVFSRSSQSGRATQSIGLLSYTFLRRTGQDDVIVPMIDFDISDHWAE
PILCGSQDDWSTNLKTILEWSPFATKMDLMQQFEDIKSHGTKIIVYNLWLNDEGIYELNF
DDDDEDIMLRDEANCGNTSKTNKRALEQQSHISYRLRYSLRAYTSILYLKKFTNFSIILR
GKPVEQFNILEELKHSKVITYRPQLAGTSKEILVETTLGFVKDAPSPVCGFNIYHKNRLI
RPFWKVTADGSSKGNGVVGVLEANFIEPAHDKQDFERSSLFFKLETRLKQMVMDYWKGHC
HLIGLKPLEPHLQNLLREQVDNAQIQSPTIDRQPVTGLAAHPRPDFRSVQSEKVGRTNSN
RELPAVQPITGNATGSVKNDTQIASSSCMSIDQICEENIQLFRRCESYIQRETELKRTIE
ELEKELEDTKKKSADLSSRLESQKKLKLLKQFG

Transcript Sequence

Gene sequence data has not been registered.